Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015911774.1_cds_XP_016461787.1_55076
CDS Infomation

[gene=LOC107785074] [db_xref=GeneID:107785074] [protein=snRNA-activating protein complex subunit-like isoform X3] [protein_id=XP_016461787.1] [location=join(25416..25435,26243..26309,26463..26518,27097..27280,28059..28147,28280..28370,34580..34675,35066..35191,35289..35549,35754..36035)] [gbkey=CDS]
Sequence

ATGTTTGATAATGAGATATCGATTGAAGATCTTAAAACTTTCAGTGAAGAGGAATTGGTG
GCTCAGGCCTTTGAAGAAGCGTTTAAGGATGATGAGCTGATCAAAGAATCTTCACAAACT
TTGACAGAGCACCTTGGTACAAGAAGAACAGATAACAGGATTTCAGTTACTGAACTTGCT
TCATTTGAAAGGTCAGAAAGAGAAGTGGACTCTTCTACTATCCATGATCCCTCAGACTAT
GTCGCCCGCGACAACAAAGGTTCAGATAAAAGCAAGTCCAACAAGAGGAAGCGGGGGAAG
AATGTTCATCAGAAGAATGCTGTTGATGAAGACTATGTTCTGAAGGTGGAACAACTTGCA
AAAATTAAAGAAAAACAAGAGGAAGAGAAAGCAGCAGCAAGATTGCATTCTTTCAATGGT
AGTTGCAGCAGCAGCCACTCTGCTTCAACATCTTCCAGTAAGATTGGCAGGATGACGTCA
CTCAAGTCAATAAGTTCGGGAACAAAGGTGAGGGCAGCAAATGCTCGTGGACATATTGCA
GTACACTTTCCAGAAGTTGTCCTCTGTATTGAGGTTTATCATTACAAAAAGACATGGGTA
AAAACTCAAGAATTTCTGGTCCTTGGGCGGCAATTTTTGACAGAAATGAGAGACAGGATA
TATTGCATTACTGATGAGATAATGAAGAAGACAGGCCAGGATGATCCGTCGGGCTATTTC
CTTGTGGAGGATGTCTTTTGCAATGATTTTAGGCATCCTGCTGCTGTAGATTATAGTAAG
CCAATACTTAATTGGCTTCAAGATTCTAAGAGTGAGGCGCTGGAAAAATGGGAATCTATC
GCCTCTGGTGAACTGCCACAGAAACAAAAGGCCCTTCTAGGCAGTAAAATTGGACCACAA
TTGCCTCATTTCAAGACCGCTAAAATGCAAGTTACTCGTTTCTGTGACTTAAGATTTCGA
CTTGGTGCTGGATATCTTTATTGTCACCAGGGGGATTGCAAGCATCAAGTTATAATAAGA
GACATGAGGTTGATACATCCAGAGGACGTACAGAACCGAGCTGCATATCCGCTGATCACC
TTTCAGCCTAAGTTGCGGTTCCAGAAATGCTCTGTTTGCAAGATTTTTAAAGCAGTTAAG
GTGACAGTTGATGATAAATGGGCTGCTGAAAATCCTTGCTACTTCTGTGACCTTTGCTAT
TACATGCTCCACTATGTAAACGGGTCGCTGCTTTACGATGATTTCTCTGTGTACGAATAT
CTCCATGAGTAA

Peptide Sequence

PEP ID

XP_016461787.1
PEP Infomation

PREDICTED: snRNA-activating protein complex subunit-like isoform X3 [Nicotiana tabacum]
Sequence

MFDNEISIEDLKTFSEEELVAQAFEEAFKDDELIKESSQTLTEHLGTRRTDNRISVTELA
SFERSEREVDSSTIHDPSDYVARDNKGSDKSKSNKRKRGKNVHQKNAVDEDYVLKVEQLA
KIKEKQEEEKAAARLHSFNGSCSSSHSASTSSSKIGRMTSLKSISSGTKVRAANARGHIA
VHFPEVVLCIEVYHYKKTWVKTQEFLVLGRQFLTEMRDRIYCITDEIMKKTGQDDPSGYF
LVEDVFCNDFRHPAAVDYSKPILNWLQDSKSEALEKWESIASGELPQKQKALLGSKIGPQ
LPHFKTAKMQVTRFCDLRFRLGAGYLYCHQGDCKHQVIIRDMRLIHPEDVQNRAAYPLIT
FQPKLRFQKCSVCKIFKAVKVTVDDKWAAENPCYFCDLCYYMLHYVNGSLLYDDFSVYEY
LHE

Transcript Sequence

Gene sequence data has not been registered.